SOMA Collection

Contains a key-value mapping where the keys are string names and the values are any SOMA-defined foundational or composed type, including SOMACollection, SOMADataFrame, SOMADenseNDArray, SOMASparseNDArray, or SOMAExperiment. (lifecycle: maturing)

Super classes

tiledbsoma::TileDBObject -> tiledbsoma::TileDBGroup -> tiledbsoma::SOMACollectionBase -> SOMACollection

Methods

Public methods

• SOMACollection$clone()

Inherited methods

• tiledbsoma::TileDBObject$class()
• tiledbsoma::TileDBObject$exists()
• tiledbsoma::TileDBObject$is_open()
• tiledbsoma::TileDBObject$mode()
• tiledbsoma::TileDBObject$reopen()
• tiledbsoma::TileDBGroup$close()
• tiledbsoma::TileDBGroup$get_metadata()
• tiledbsoma::TileDBGroup$length()
• tiledbsoma::TileDBGroup$names()
• tiledbsoma::TileDBGroup$open()
• tiledbsoma::TileDBGroup$print()
• tiledbsoma::TileDBGroup$remove()
• tiledbsoma::TileDBGroup$set_metadata()
• tiledbsoma::TileDBGroup$to_data_frame()
• tiledbsoma::TileDBGroup$to_list()
• tiledbsoma::SOMACollectionBase$add_new_collection()
• tiledbsoma::SOMACollectionBase$add_new_dataframe()
• tiledbsoma::SOMACollectionBase$add_new_dense_ndarray()
• tiledbsoma::SOMACollectionBase$add_new_sparse_ndarray()
• tiledbsoma::SOMACollectionBase$create()
• tiledbsoma::SOMACollectionBase$get()
• tiledbsoma::SOMACollectionBase$initialize()
• tiledbsoma::SOMACollectionBase$set()

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Method clone()

The objects of this class are cloneable with this method.

Usage

SOMACollection$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.